Why Does My Toddler’s Poop Smell Like Mothballs?

A mothball-like scent emanating from a toddler’s stool is a distinct chemical odor, often reminiscent of naphthalene or paradichlorobenzene. This suggests the excretion of unusual volatile substances. While the cause is often temporary, this particular scent can also signal a more serious underlying issue. This article explores the scientific basis for this odor, examining causes that range from simple environmental exposure to rare, inherited metabolic conditions.

The Chemical Source of the Scent

The familiar odor of mothballs is caused by volatile organic compounds (VOCs), primarily naphthalene or its common substitute, paradichlorobenzene. These compounds readily turn into gas at room temperature, making the scent pervasive. When a similar odor is detected in stool, it indicates that a different set of internally produced VOCs are mimicking the chemical structure of these substances.

The gut microbiome naturally produces VOCs during digestion as it breaks down food. Specifically, the bacterial fermentation of the amino acid tryptophan generates compounds called indole and skatole. In concentrated form, these compounds produce a naphthalene-like odor. An imbalance in the gut’s bacterial population or issues with protein digestion can lead to an unusual concentration of these metabolites, temporarily causing the chemical scent.

Non-Medical Causes: Diet and Environmental Exposure

The most immediate non-medical cause involves direct environmental exposure to the actual source of the smell. Toddlers often investigate their environment by taste, and ingesting actual mothballs containing naphthalene or paradichlorobenzene is highly toxic. These substances are often lethal when swallowed by a small child, and their presence in the home should be immediately eliminated. The chemical is absorbed rapidly, and systemic symptoms quickly follow a significant exposure.

A more common cause is a transient dietary shift or an issue with nutrient processing that is not disease-related. For example, a sudden increase in protein intake can overwhelm the digestive system, leading to more undigested amino acids reaching the colon. The subsequent fermentation by gut bacteria generates a higher load of metabolites, altering the stool’s volatile chemical profile. This produces a noticeable chemical smell, which is usually transient and resolves quickly once the digestive system normalizes.

Inborn Errors of Metabolism and Poop Odor

A persistent, strong, and unusual chemical odor from a child’s waste can signal a rare group of genetic conditions called Inborn Errors of Metabolism (IEMs). These disorders involve a missing or defective enzyme necessary to break down specific nutrients, such as amino acids or fatty acids. When the body cannot process the nutrient, toxic metabolites accumulate in the blood and are excreted in the urine, sweat, or stool.

The accumulation of these unprocessed compounds generates the distinct chemical odor. One example is Isovaleric Acidemia (IVA), an organic acid disorder where the body lacks the enzyme to process the amino acid leucine. This deficiency leads to a buildup of isovaleric acid, which causes a characteristic “sweaty feet” or “cheesy” odor that some parents may mistakenly describe as a strong chemical scent.

Other organic acidemias and amino acid disorders, such as Maple Syrup Urine Disease (MSUD), also cause unique, strong chemical smells due to metabolite buildup. In MSUD, the urine and sweat can smell like burnt sugar or maple syrup. The underlying mechanism is the same: a genetic defect causes a metabolic roadblock. The body attempts to excrete the toxic compounds, resulting in a persistent chemical odor that signals a breakdown in normal cellular processing.

Signs Requiring Immediate Medical Consultation

While a temporary, isolated change in stool odor is rarely a medical emergency, the presence of a strong chemical smell alongside systemic symptoms requires immediate consultation with a pediatrician. Parents should be alarmed if the unusual odor is accompanied by a sudden onset of extreme lethargy, which is a state of profound fatigue or unresponsiveness. This is a potential sign of metabolic crisis or severe toxicity.

Other accompanying signs that necessitate urgent medical evaluation include persistent vomiting, refusal to feed, or the onset of seizures. Jaundice, which is a yellowing of the skin or eyes, should also prompt immediate attention. Jaundice can signal liver damage from a metabolic disorder or hemolytic anemia caused by naphthalene poisoning. A persistent chemical odor coupled with these signs of systemic illness must be investigated promptly to rule out serious conditions.