What Is the FQ Modifier for Federally Qualified Health Centers?

Medical coding is a precise language used to communicate health services to payers, like insurance companies and government programs. These claims require standard codes, such as CPT and HCPCS codes, to describe the procedure or service performed. Modifiers are two-character additions appended to these standard codes, providing extra detail about the service provided. The FQ modifier is a specific identifier used in healthcare billing to indicate a particular circumstance surrounding a service delivered by a Federally Qualified Health Center (FQHC). This modifier signals to the payer that the claim originates from this specific facility type and involves a distinct method of service delivery.

The Context: Understanding Federally Qualified Health Centers

Federally Qualified Health Centers (FQHCs) are outpatient clinics providing comprehensive primary care to underserved populations. They serve patients regardless of their ability to pay, often using a sliding fee scale based on income and family size. FQHCs must meet stringent federal requirements and are typically funded through grants, primarily Section 330 of the Public Health Service Act.

This funding allows FQHCs to offer an extensive range of services beyond typical physician offices. These services include dental, behavioral health, substance abuse treatment, and enabling services like translation and transportation. Their mission is rooted in improving the health outcomes of low-income, uninsured, and marginalized communities, necessitating a specialized billing system distinct from private practices.

Defining the FQ Modifier and Its Purpose

The FQ modifier is a specific code used in claims submissions to Medicare and other payers, serving a specialized function. Its precise definition is to identify a telehealth service that was furnished using real-time audio-only communication technology. This modifier applies only to this specific modality of service delivery, not to every service provided by an FQHC.

The core function of the FQ modifier is to distinguish an audio-only visit from a standard in-person visit or a synchronous audio-visual telehealth visit. It communicates to the payer that the service met the criteria for audio-only delivery, which is typically reserved for situations where the patient lacks the technical capacity for video. Appending the FQ modifier is the responsibility of the FQHC’s billing and coding staff, ensuring compliance with federal guidelines for this particular method of service.

Specific Usage Rules and Exclusions

The application of the FQ modifier is limited to Federally Qualified Health Centers and Rural Health Clinics (RHCs). It must be appended to the appropriate service code, such as an Evaluation and Management (E/M) code, when the encounter was conducted solely through a real-time, two-way telephone call. The use of this modifier is particularly relevant for services like mental and behavioral health, where audio-only communication may be clinically appropriate and covered under specific allowances.

Medicare permits FQHCs and RHCs to use the FQ modifier specifically for audio-only telehealth. This is sometimes done in conjunction with CPT modifier 93, which also signifies an audio-only service. This dual-modifier approach ensures the payer recognizes both the communication type and the facility type.

The FQ modifier must be excluded from claims for services delivered in-person or via synchronous audio-visual technology, which would instead require a different modifier, such as 95. It is also not used for the vast majority of FQHC visits billed under the standard Prospective Payment System (PPS) encounter codes (e.g., G0466-G0470).

Impact on Reimbursement

The correct use of the FQ modifier has a direct effect on the reimbursement an FQHC receives for that specific telehealth service. FQHCs typically operate under the Medicare Prospective Payment System (PPS), which pays a single, bundled rate per qualified patient visit. This PPS rate is a national base rate, adjusted annually and modified by geographic factors.

When the FQ modifier is correctly applied to an audio-only telehealth service, it signals the payer to process the claim outside of the standard FQHC PPS encounter payment. Instead, the service is reimbursed based on the Medicare Physician Fee Schedule (PFS) methodology, which is a fee-for-service rate for the specific procedure code. This mechanism ensures that FQHCs are appropriately compensated for providing services remotely using the audio-only modality. The presence of the FQ code correctly triggers the alternative payment pathway, preventing the claim from being incorrectly processed under the full PPS rate.