What Is the Difference Between an Allele and a Gene?

The study of heredity involves fundamental concepts like the gene and the allele, which describe the basic units of inheritance that determine every characteristic of a living organism. While closely related, understanding the precise distinction between them is necessary to grasp how traits are passed down and expressed.

The Gene as the Blueprint and Location

A gene represents the fundamental unit of heredity, acting as the instruction manual for a specific biological function or characteristic. It is a defined segment of deoxyribonucleic acid (DNA) that provides the code for creating a protein or a functional RNA molecule. Proteins perform the vast majority of tasks within a cell, from forming structures to catalyzing chemical reactions.

Every gene has a fixed address on a chromosome, known as its locus. This location ensures that the instructions for a specific trait, such as eye color or blood type, are consistently found in the same spot across all individuals of a species. The gene dictates what trait an organism possesses, establishing the general category of the characteristic. For example, a gene determines the presence of eye pigment, regardless of whether the resulting color is blue or brown.

In humans and most other complex organisms, chromosomes exist in pairs, meaning two copies of every gene are present, one inherited from each biological parent. This paired structure is the foundation of genetic inheritance, providing a backup and a source of variation. The human genome contains approximately 19,900 genes that code for proteins.

The Allele as the Specific Variation

An allele is a variant form of a gene, representing slight differences in the DNA sequence at the gene’s specific locus. If the gene instructs for “eye color,” the alleles are the distinct versions of that instruction, such as the sequence leading to blue or brown pigment. These small variations can alter the structure or function of the resulting protein, leading to a visible difference in the trait.

Since humans are diploid organisms, they carry two alleles for every gene, one on each of the paired chromosomes. This pair determines the specific expression of the trait, defining how the characteristic manifests. Inheriting two identical alleles means the individual is homozygous for that trait, while inheriting two different alleles results in a heterozygous condition.

For example, the gene responsible for the ABO blood group system has multiple possible alleles. These allele combinations interact to produce the specific blood type, generating biological variation across the species.

Determining Traits: The Genotype and Phenotype Connection

The relationship between genes and alleles culminates in the concepts of genotype and phenotype. An individual’s genotype is the specific combination of the two alleles inherited for a particular gene, serving as the underlying genetic code for the trait.

The phenotype is the observable characteristic or physical trait that results from the genotype’s expression. This includes visible features like hair texture, height, and eye color, as well as internal characteristics like blood pressure or disease susceptibility. The transformation from genotype to phenotype is governed by how the two alleles interact with one another.

In simple Mendelian inheritance, one allele may be dominant, meaning its instruction is followed even if a different, recessive allele is present. For instance, a person with one dominant brown eye allele and one recessive blue eye allele will have a heterozygous genotype, but their phenotype will be brown eyes. The blue eye color phenotype only appears if the genotype is homozygous for the recessive allele.

However, the final phenotype is not solely determined by the genotype; environmental factors also play a significant role. Identical twins share the same genotype, but differences in diet or exposure to sunlight will cause subtle variations in their phenotypes over time.