What Is a Codon in DNA and How Does It Build Proteins?

DNA is the blueprint for life, carrying instructions for an organism’s development, function, growth, and reproduction. Specific DNA segments contain instructions for building proteins, the cell’s workhorses. Proteins perform a wide array of functions, from forming structural components to catalyzing biochemical reactions. This organization ensures accurate protein-building instructions are maintained and passed on.

Defining the Codon

A codon represents a fundamental unit of genetic information, acting like a “word” in the genetic language. It is a specific sequence of three consecutive nucleotides. In DNA, these nucleotides are adenine (A), thymine (T), cytosine (C), and guanine (G). When DNA’s information is copied into messenger RNA (mRNA), thymine is replaced by uracil (U), so mRNA codons consist of A, U, C, and G.

This triplet arrangement provides enough unique combinations to specify all 20 amino acids for protein construction, plus start and stop signals. With four possible nucleotides, a two-nucleotide code would only generate 16 combinations, insufficient for the 20 amino acids. A three-nucleotide code yields 64 potential combinations, providing more than enough “words” for the genetic dictionary.

How Codons Become Proteins

The journey from genetic instructions in DNA to a functional protein involves a two-step process: transcription and translation. Transcription begins in the cell’s nucleus, where a segment of DNA, representing a gene, is copied into a molecule of messenger RNA (mRNA). The DNA nucleotide sequence is used as a template, transcribing DNA codons into complementary mRNA codons. The mRNA molecule then carries this genetic message out of the nucleus and into the cytoplasm.

In the cytoplasm, mRNA encounters ribosomes, the cellular machinery for protein synthesis. Ribosomes “read” the mRNA codons sequentially, three nucleotides at a time. As each mRNA codon is read, a corresponding transfer RNA (tRNA) molecule, carrying a specific amino acid, recognizes and binds to it. tRNA molecules act as adaptors, ensuring the correct amino acid is added to the growing protein chain based on the mRNA’s codon sequence. This continues until a polypeptide (a chain of amino acids) is assembled, which then folds into its functional three-dimensional protein structure.

The Universal Genetic Code

The genetic code is the set of rules by which the sequence of codons in an mRNA molecule is translated into the sequence of amino acids in a protein. A characteristic of this code is its near universality: the same codons generally specify the same amino acids across almost all living organisms, from bacteria to humans. This shared code highlights the common evolutionary history of life on Earth.

Another feature is the degeneracy, or redundancy, of the genetic code. While each codon codes for only one specific amino acid, most amino acids are specified by more than one codon. For example, leucine is encoded by six different codons. This redundancy provides protection against potential mutations, as a change in a single nucleotide might still result in the same amino acid being incorporated into the protein.

The genetic code also includes specific codons that signal the initiation and termination of protein synthesis. The start codon, typically AUG, signals where the ribosome should begin reading the mRNA sequence. Conversely, three different stop codons (UAA, UAG, and UGA) mark the end of the protein-coding sequence, prompting the release of the completed protein.

When Codons Change

Alterations in the sequence of codons, known as mutations, can have various impacts on the resulting protein. A point mutation, where a single nucleotide is changed, inserted, or deleted, can directly affect a codon. If a point mutation changes a codon to one that specifies a different amino acid, it can alter the protein’s structure and potentially its function.

Alternatively, a mutation might change a codon into a premature stop codon. This would cause protein synthesis to terminate early, often resulting in a shortened, non-functional protein. However, due to the degeneracy of the genetic code, some point mutations, called silent mutations, may change a codon but still result in the incorporation of the same amino acid. In such cases, the protein’s sequence remains unchanged, and its function is unaffected. These changes underscore the importance of precise instructions for proper protein production.