What Causes Zucchini to Rot on the Vine?

Zucchini is a prolific garden favorite, but seeing young fruit shrivel, turn yellow, or become mushy before harvest is a common frustration. This premature decay is rarely caused by a single issue, but rather a combination of environmental problems and biological factors. Understanding the specific nature of the rot helps distinguish between pollination failure, a physiological disorder, or a pathogenic infection. Identifying the cause is the first step in saving the harvest.

Inadequate Pollination

Zucchini plants have separate male and female flowers, requiring pollen transfer for successful fruit development. Male flowers appear first on a long stem and contain the pollen. Female flowers are identified by the miniature, unpollinated fruit (ovary) located directly behind the petals.

This reproductive process requires insects, usually bees, to move pollen from the male flower’s stamen to the female flower’s stigma. Zucchini flowers are open and receptive only for a single morning, from dawn until mid-day. If insufficient pollen is transferred during this brief time, the plant aborts the fruit, leading to early rot.

A fruit that failed pollination will quickly stop growing, turn yellow, and shrivel, usually rotting from the blossom end. This failure is common early in the season when few female flowers are present or when cool, rainy weather reduces pollinator activity. Gardeners can intervene by hand-pollinating in the early morning. To hand-pollinate, pluck a fresh male flower, remove the petals to expose the pollen-dusted anther, and gently rub the anther onto the center of the female flower.

Environmental Stress and Nutrient Deficiencies

A significant cause of premature fruit decay is Blossom End Rot (BER), a non-infectious physiological disorder. BER is caused by the plant’s inability to efficiently move calcium into the rapidly growing fruit tissue. The disorder manifests as a sunken, dark brown or black spot on the end of the fruit, opposite the stem.

Although calcium is necessary for healthy cell wall formation, the soil usually contains sufficient amounts. The issue lies with inconsistent watering, which disrupts the transport of calcium from the soil to the fruit. Both extended dry periods and sudden overwatering can induce BER by creating a moisture imbalance. Maintaining consistent soil moisture through regular, deep watering is key, as water is the vehicle for calcium uptake.

Other environmental factors, such as extreme heat, can also cause the plant to drop or rot fruit. Temperatures consistently above 90°F can lead to flower sterility or plant exhaustion, causing the zucchini to shed fruit to conserve resources. Furthermore, excessive nitrogen fertilizer encourages leaf growth at the expense of fruit development, stressing the plant’s ability to support all developing squash.

Fungal and Bacterial Infections

True infections, caused by pathogens, result in distinct and rapid decay of the fruit tissue. Phytophthora blight is a destructive water mold that thrives in warm, saturated soil and spreads via splashing water. This infection causes a rapid, dark, water-soaked rot, often where the fruit touches the ground. Infected fruit develops a visible layer of white, cottony growth over the affected area.

Bacterial Soft Rot, caused by Pectobacterium species, is characterized by a mushy, foul-smelling breakdown of the tissue. This soft rot begins when bacteria enter the fruit through wounds from insect feeding or gardening tools. The bacteria produce enzymes that liquefy the plant cells, turning the firm flesh into a slimy mass. Maintaining clean tools and promptly removing damaged fruit prevents the spread of this rot.

Even common leaf diseases can indirectly lead to fruit rot by weakening the plant. Severe Powdery Mildew, for example, hinders photosynthesis and causes foliage to die prematurely. This loss of leaf area stresses the plant, making the squash vulnerable to secondary infections. Ensuring good air circulation and avoiding overhead watering minimizes conditions favorable for pathogens.