How DNA Was Discovered: From Nuclein to the Double Helix

The journey to understand deoxyribonucleic acid, or DNA, spans nearly a century of scientific inquiry, transforming a simple chemical isolate into the recognized blueprint of life. Its discovery was a process of incremental breakthroughs, beginning with its initial isolation and culminating in the visualization of its elegant, twisting structure. This path involved a conceptual shift, moving from the study of a mysterious substance within the cell nucleus to the definitive proof that this substance carried the genetic code.

The Initial Discovery of Nucleic Acid

The first step in uncovering DNA occurred in 1869 when Swiss physician and chemist Friedrich Miescher began studying the composition of cells. Miescher worked with white blood cells, isolating a novel, phosphorus-rich substance from the nuclei, which he named “nuclein.”

This material was chemically distinct from proteins due to its high phosphorus content and lack of sulfur. The substance was later renamed nucleic acid, but its biological purpose remained unknown for decades.

Russian-American biochemist Phoebus Levene performed further chemical analysis in the early 1900s. Levene determined the basic components of nucleic acid: a sugar (deoxyribose), a phosphate group, and four nitrogen-containing bases (adenine, guanine, cytosine, and thymine). He identified this three-part unit as a nucleotide, forming the molecular backbone.

Levene proposed the influential, though incorrect, tetranucleotide hypothesis. This model suggested that DNA was a simple, repetitive polymer made of these four nucleotides in a fixed, equal ratio. This perceived simplicity led scientists to dismiss DNA as too monotonous to carry genetic instructions, keeping attention focused on proteins.

Establishing DNA as the Genetic Material

The first clue that DNA carried hereditary information came from an experiment on bacterial infection conducted by British bacteriologist Frederick Griffith in 1928. Griffith was working with two strains of Streptococcus pneumoniae: the virulent “S” strain and the non-virulent “R” strain.

Griffith found that injecting mice with a mixture of harmless live R-strain bacteria and heat-killed S-strain bacteria resulted in death. He recovered live, virulent S-strain bacteria from the dead mice, indicating that an unknown substance from the dead cells had “transformed” the living R-strain into a lethal form. Griffith termed this agent the “transforming principle.”

This transforming principle was identified in 1944 by Oswald Avery, Colin MacLeod, and Maclyn McCarty. Building on Griffith’s work, they purified the material from the heat-killed S-strain cells and treated it with enzymes that selectively destroyed macromolecules. They found that transformation ceased only when the extract was treated with DNase, an enzyme that degrades DNA.

This result provided the first direct evidence that DNA was responsible for transferring genetic traits. However, the scientific community remained skeptical, still favoring proteins as the genetic material. Definitive confirmation arrived in 1952 with the work of Alfred Hershey and Martha Chase, who used bacteriophages, viruses that infect bacteria.

Hershey and Chase designed an experiment exploiting the chemical differences between DNA and protein. They labeled viral DNA with radioactive phosphorus-32 and labeled the protein coat with radioactive sulfur-35. After allowing the labeled viruses to infect bacteria, they used a blender to shear the empty viral coats from the bacterial surfaces.

Centrifugation separated the heavier bacteria from the lighter viral coats. When bacteria were infected with phosphorus-labeled viruses, the radioactive marker was found inside the bacterial cells, indicating viral DNA entry. Conversely, the sulfur marker remained outside the cells in the protein coats. This proved conclusively that DNA, not protein, carried the genetic instructions for viral replication.

Determining the Double Helix Structure

Once DNA was conclusively identified as the genetic material, focus shifted to determining its physical structure to understand replication and function. Austrian biochemist Erwin Chargaff analyzed the base composition of DNA in the late 1940s. He found that despite variation between species, the amount of adenine (A) always equaled thymine (T), and guanine (G) always equaled cytosine (C).

These findings, known as Chargaff’s rules, demonstrated a fundamental 1:1 ratio between the bases, providing a chemical constraint for any structural model. Simultaneously, researchers at King’s College London used X-ray diffraction to investigate DNA fibers. Rosalind Franklin produced an exceptionally clear X-ray image in May 1952, famously known as “Photo 51.”

The distinct “X” pattern in Photo 51 provided quantitative data indicating a helical structure with specific dimensions. The data suggested the phosphate-sugar backbone was on the exterior of the molecule. Maurice Wilkins, Franklin’s colleague, shared this crucial X-ray data with James Watson and Francis Crick at the University of Cambridge.

Watson and Crick synthesized the available chemical and physical data to construct their revolutionary model in 1953. They used Chargaff’s rules to propose that the bases paired specifically (A with T, and G with C), held together by hydrogen bonds, forming the “rungs” of a ladder. The sugar-phosphate components formed the two side rails, twisted into a double helix.

Their model described two long strands running in opposite directions, a configuration known as antiparallel. This structure immediately suggested a mechanism for replication, where the two strands could separate and each serve as a template for a new complementary strand. The double helix structure reconciled DNA’s chemical composition with its biological function.