Can Hashimoto’s Cause Stomach Issues?

Hashimoto’s thyroiditis, an autoimmune condition where the body attacks the thyroid gland, frequently results in hypothyroidism (an underactive thyroid state). This thyroid dysfunction triggers a wide range of systemic symptoms, and the digestive tract is particularly susceptible. The connection between Hashimoto’s and stomach issues is well-documented through both hormonal effects and shared autoimmune mechanisms. This relationship involves several distinct and interconnected gastrointestinal disorders. Understanding how the thyroid affects the stomach and intestines is necessary for effective management of these common co-occurring symptoms.

The Hormonal Impact on Gut Motility

Thyroid hormones (T4 and T3) regulate the body’s overall metabolism, a function that extends directly to the digestive system. When Hashimoto’s leads to hypothyroidism, low hormone levels slow metabolic processes, including the muscular contractions of the gastrointestinal tract. This mechanical slowing is termed reduced gut motility, which affects the entire system.

Peristalsis, the coordinated muscular waves that propel food through the intestines, becomes sluggish and less effective. This reduction in motility increases the transit time of food and waste, meaning substances linger longer than they should. Delayed gastric emptying, where the stomach takes too long to release its contents, is a common manifestation of this hormonal slowdown.

This sluggish movement often results in chronic constipation, one of the most frequently reported gastrointestinal complaints in people with hypothyroidism. The prolonged presence of contents in the colon can also lead to increased fermentation by gut bacteria, contributing to discomfort, abdominal bloating, and feelings of excessive fullness. Managing thyroid hormone levels is often the first step in restoring normal digestive function and alleviating these motility-related symptoms.

Shared Autoimmune Links and Co-occurring Conditions

The immune system’s propensity to attack the body’s own tissues is not limited to the thyroid; a person with one autoimmune disease is more likely to develop others. This shared autoimmune predisposition establishes a direct link between Hashimoto’s and several specific gastrointestinal conditions. These conditions are independent of the hormonal effects of hypothyroidism, arising instead from a common underlying immune system dysfunction.

Celiac Disease, an autoimmune reaction to gluten that damages the small intestine, exhibits the strongest link. Due to shared genetic markers and similar underlying immune triggers, it is recommended that all individuals with Hashimoto’s be screened for Celiac Disease.

Another co-occurring condition is Autoimmune Gastritis (AG), which involves the immune system attacking the parietal cells lining the stomach. This attack impairs their ability to produce hydrochloric acid and intrinsic factor. The destruction of these cells leads to pernicious anemia because the lack of intrinsic factor prevents the proper absorption of Vitamin B12, which is essential for red blood cell formation and nerve function. AG is reported to occur in 10 to 40 percent of individuals with Hashimoto’s, highlighting a clear connection between these two specific autoimmune targets.

Specific Gastrointestinal Issues Associated with Hashimoto’s

The hormonal and autoimmune mechanisms frequently lead to specific functional diagnoses within the digestive tract. Hypochlorhydria, or low stomach acid, is a significant issue, resulting either from the direct autoimmune attack of Autoimmune Gastritis or the depressed metabolic state of chronic hypothyroidism. Insufficient stomach acid impairs the initial breakdown of food, reduces the sterilization of ingested bacteria, and negatively affects the absorption of crucial nutrients like iron, calcium, and Vitamin B12.

The combination of low stomach acid and slow motility creates an environment for Small Intestinal Bacterial Overgrowth (SIBO). SIBO occurs when an excessive amount of bacteria colonizes the small intestine. The slow transit time allows bacteria to migrate upward from the large intestine and proliferate, while the low stomach acid fails to kill them off effectively.

SIBO is a major cause of symptoms like severe bloating, excessive gas production, and abdominal pain in Hashimoto’s patients. These underlying factors contribute to the high co-occurrence rate of Irritable Bowel Syndrome (IBS) in those with thyroid autoimmunity. The chronic issues of slow transit, nutrient malabsorption, and bacterial overgrowth mimic and exacerbate the symptoms commonly defined as IBS.

Testing and Management Strategies for GI Symptoms

Individuals with Hashimoto’s who experience persistent digestive discomfort should pursue targeted testing to identify the specific underlying cause. Given the strong autoimmune association, screening for Celiac Disease through blood tests is a necessary first step.

Evaluating for Autoimmune Gastritis is accomplished by checking for parietal cell antibodies and intrinsic factor antibodies, alongside assessments of Vitamin B12 and iron levels. If symptoms like significant bloating, gas, and abdominal pain are prominent, a SIBO breath test can measure hydrogen and methane gases produced by bacteria in the small intestine, confirming the presence of an overgrowth.

Management involves a multi-pronged approach that addresses both the thyroid and the gut. Optimizing thyroid hormone replacement therapy is foundational, as improving hormone levels enhances gut motility and reduces the environment that fosters bacterial overgrowth.

Dietary strategies play a supportive role, with a temporary low-FODMAP diet potentially alleviating SIBO symptoms by reducing fermentable sugars that feed the bacteria. Supporting motility is also paramount, often through hydration, fiber, and sometimes prokinetic agents that stimulate the muscular sweeping action of the small intestine. Consulting with a practitioner who understands the intricate connection between thyroid autoimmunity and the digestive system is important for creating a comprehensive and effective treatment plan.