Why Do Cheek Cells Need to Be Lysed Before PCR?

The Polymerase Chain Reaction (PCR) is a widely used laboratory technique that amplifies specific DNA sequences, creating millions of copies from a small initial sample. This process is fundamental in various fields, from disease diagnostics to forensic investigations. Before PCR, DNA must be obtained from a biological sample, such as human cheek cells. Preparing these cells to release their genetic material is a necessary first step for successful DNA analysis.

Understanding Cell Structure

Human cheek cells are eukaryotic cells, possessing a nucleus where their genetic material is housed. They have an outer cell membrane, which encloses the cell’s contents. Within the cell, DNA is protected inside the nucleus, surrounded by a nuclear membrane. This packaging of DNA within both the cell and nuclear membranes highlights the need for specialized methods to access it.

The Purpose of Lysis

Lysis is the process of disrupting the cell membrane and, in eukaryotic cells like cheek cells, the nuclear membrane. This releases the cell’s internal contents, including the DNA, into a solution. The primary goal of lysis is to make the DNA accessible for subsequent molecular procedures. Common methods for achieving lysis involve chemical agents, such as detergents, which disrupt membranes by dissolving their lipid and protein components. Physical methods, including heat or mechanical disruption, can also be employed to break open cells.

How Lysis Enables PCR

Once the cell and nuclear membranes are broken down through lysis, the DNA is freed from its protected environment and becomes available as a template for the PCR reaction. In PCR, specific enzymes, such as DNA polymerase, and short synthetic DNA fragments called primers are required. These components need direct access to the DNA strands to initiate the synthesis of new DNA copies. Without effective lysis, the DNA remains confined within the cellular structures, preventing the enzymes and primers from binding and initiating the amplification process.

What Happens if Lysis is Incomplete?

Insufficient cell lysis can significantly impact the success of PCR. If cells are not properly lysed, only a limited amount of DNA, or potentially no DNA at all, will be released into the solution. This shortage of available DNA template means the PCR reaction will have very little or no starting material to amplify. Consequently, the amplification of the target DNA sequence will be weak or may not occur at all, leading to inconclusive or failed experimental results. Effective and complete lysis is therefore important for obtaining a sufficient quantity of accessible DNA, which is a prerequisite for successful molecular biology experiments like PCR.